STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP77155.1Glycosyltransferase, GT2 family. (1051 aa)    
Predicted Functional Partners:
SDP41080.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.992
SDP77168.1
Methyltransferase domain-containing protein.
 
    0.935
SDO61612.1
Acyl transferase domain-containing protein.
  
 0.912
SDP98143.1
Acyl transferase domain-containing protein.
 
 0.912
SDP40646.1
Amino acid adenylation domain-containing protein.
  
 0.896
SDP99076.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.896
SDP75845.1
UDP-galactopyranose mutase.
  
 
 0.883
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
 
 0.857
SDN88891.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.855
SDN86065.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.854
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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