STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP80575.1Zinc transport system permease protein. (267 aa)    
Predicted Functional Partners:
SDP80560.1
Zinc transport system ATP-binding protein.
 
 0.997
SDO89326.1
Zinc/manganese transport system ATP-binding protein.
  
 0.990
SDO89341.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.976
SDP80594.1
Zinc transport system substrate-binding protein.
    
  0.941
SDN99156.1
Acetolactate synthase, small subunit.
  
  
  0.735
SDP85891.1
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator.
  
 
 0.718
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
  
 0.693
SDP80544.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.689
SDP53439.1
Threonine synthase.
    
  0.667
SDP96639.1
Threonine synthase.
    
  0.667
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.