STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP86477.1Succinate dehydrogenase / fumarate reductase iron-sulfur subunit. (249 aa)    
Predicted Functional Partners:
SDN83208.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
  
 0.999
SDP86501.1
Hypothetical protein.
 
 
 0.999
SDN83178.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
  
 0.998
SDP86491.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
 0.998
SDN89597.1
2-oxoglutarate decarboxylase.
  
 0.992
SDP02748.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
 0.990
SDP85657.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.988
SDN83149.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
 0.987
sucD
succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.978
SDP32735.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.971
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.