Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN88588.1 | SDO58046.1 | SAMN05421507_101605 | SAMN05421507_10326 | GAF domain-containing protein. | Regulatory protein, luxR family. | 0.960 |
SDN88588.1 | SDO65478.1 | SAMN05421507_101605 | SAMN05421507_103255 | GAF domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDN88588.1 | SDP36908.1 | SAMN05421507_101605 | SAMN05421507_107238 | GAF domain-containing protein. | Predicted ATPase. | 0.950 |
SDN88588.1 | SDP68288.1 | SAMN05421507_101605 | SAMN05421507_112175 | GAF domain-containing protein. | DNA-binding transcriptional regulator, CsgD family. | 0.950 |
SDN88588.1 | SDP68324.1 | SAMN05421507_101605 | SAMN05421507_112177 | GAF domain-containing protein. | Regulatory protein, luxR family. | 0.950 |
SDN88588.1 | SDP86540.1 | SAMN05421507_101605 | SAMN05421507_117123 | GAF domain-containing protein. | Regulatory protein, luxR family. | 0.779 |
SDN88588.1 | SDP86560.1 | SAMN05421507_101605 | SAMN05421507_117124 | GAF domain-containing protein. | Predicted kinase. | 0.890 |
SDN88588.1 | SDP94610.1 | SAMN05421507_101605 | SAMN05421507_12410 | GAF domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDN88588.1 | SDP97595.1 | SAMN05421507_101605 | SAMN05421507_1331 | GAF domain-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SDN88588.1 | ribBA | SAMN05421507_101605 | SAMN05421507_105271 | GAF domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.938 |
SDO58046.1 | SDN88588.1 | SAMN05421507_10326 | SAMN05421507_101605 | Regulatory protein, luxR family. | GAF domain-containing protein. | 0.960 |
SDO58046.1 | SDO65478.1 | SAMN05421507_10326 | SAMN05421507_103255 | Regulatory protein, luxR family. | PAS domain S-box-containing protein. | 0.756 |
SDO58046.1 | SDP36908.1 | SAMN05421507_10326 | SAMN05421507_107238 | Regulatory protein, luxR family. | Predicted ATPase. | 0.691 |
SDO58046.1 | SDP68288.1 | SAMN05421507_10326 | SAMN05421507_112175 | Regulatory protein, luxR family. | DNA-binding transcriptional regulator, CsgD family. | 0.706 |
SDO58046.1 | SDP68324.1 | SAMN05421507_10326 | SAMN05421507_112177 | Regulatory protein, luxR family. | Regulatory protein, luxR family. | 0.706 |
SDO58046.1 | SDP86540.1 | SAMN05421507_10326 | SAMN05421507_117123 | Regulatory protein, luxR family. | Regulatory protein, luxR family. | 0.443 |
SDO58046.1 | SDP94610.1 | SAMN05421507_10326 | SAMN05421507_12410 | Regulatory protein, luxR family. | Signal transduction histidine kinase. | 0.845 |
SDO58046.1 | SDP97595.1 | SAMN05421507_10326 | SAMN05421507_1331 | Regulatory protein, luxR family. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.876 |
SDO65478.1 | SDN88588.1 | SAMN05421507_103255 | SAMN05421507_101605 | PAS domain S-box-containing protein. | GAF domain-containing protein. | 0.999 |
SDO65478.1 | SDO58046.1 | SAMN05421507_103255 | SAMN05421507_10326 | PAS domain S-box-containing protein. | Regulatory protein, luxR family. | 0.756 |
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