STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP89311.1DNA-binding transcriptional regulator, Lrp family. (146 aa)    
Predicted Functional Partners:
SDN75478.1
DNA-binding transcriptional regulator, Lrp family.
  
     0.770
SDP50355.1
DNA-binding transcriptional regulator, Lrp family.
  
     0.751
SDO04472.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
  
 
 0.671
SDN75415.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.670
SDP89303.1
Methionine-gamma-lyase.
       0.578
SDP32735.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.506
SDO11543.1
Para-aminobenzoate synthetase.
   
 
  0.486
SDP68578.1
Para-aminobenzoate synthetase.
   
 
  0.486
SDP79995.1
Para-aminobenzoate synthetase.
   
 
  0.486
SDP96419.1
Para-aminobenzoate synthetase.
   
 
  0.486
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.