STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP89336.1Helix-turn-helix. (194 aa)    
Predicted Functional Partners:
SDP89321.1
Branched-chain amino acid transport protein (AzlD).
 
   
 0.917
SDP89328.1
4-azaleucine resistance probable transporter AzlC.
 
   
 0.874
SDP73179.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
 
  0.792
SDO31087.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
    
 0.671
SDP85657.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.531
SDP76199.1
Prephenate dehydratase.
  
 
 0.517
SDO82666.1
Hypothetical protein.
  
  
 0.493
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.490
SDP55826.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
 
  0.484
SDO61845.1
Acyl transferase domain-containing protein.
  
 
 0.444
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.