STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP89562.1Protein N-acetyltransferase, RimJ/RimL family. (163 aa)    
Predicted Functional Partners:
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.710
SDP32735.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.688
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.680
SDO10043.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.679
SDP89544.1
ATP adenylyltransferase.
       0.678
SDN75415.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.642
SDP89568.1
Hypothetical protein.
       0.533
SDP89538.1
Hypothetical protein.
       0.529
SDO81285.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.492
SDO73536.1
Lysine N6-hydroxylase.
  
 
  0.486
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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