STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP89734.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
SDP89725.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.774
SDO80734.1
Hypothetical protein.
  
     0.662
SDP89743.1
Tetratricopeptide repeat-containing protein.
  
     0.648
SDP80681.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
 
    0.626
SDO06463.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.558
SDP62803.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.558
SDP89715.1
Tetratricopeptide repeat-containing protein.
 
     0.558
SDP86592.1
Trypsin-like peptidase domain-containing protein.
  
     0.555
SDN81621.1
Hypothetical protein.
  
     0.502
SDP32250.1
Protein of unknown function.
  
     0.488
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
Server load: low (16%) [HD]