Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN81621.1 | SDP89734.1 | SAMN05421507_101365 | SAMN05421507_11968 | Hypothetical protein. | Hypothetical protein. | 0.502 |
SDO06463.1 | SDP80681.1 | SAMN05421507_1011215 | SAMN05421507_11567 | Ribosomal protein S12 methylthiotransferase accessory factor. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.493 |
SDO06463.1 | SDP89734.1 | SAMN05421507_1011215 | SAMN05421507_11968 | Ribosomal protein S12 methylthiotransferase accessory factor. | Hypothetical protein. | 0.558 |
SDO80734.1 | SDP89734.1 | SAMN05421507_10421 | SAMN05421507_11968 | Hypothetical protein. | Hypothetical protein. | 0.662 |
SDP32250.1 | SDP86592.1 | SAMN05421507_10754 | SAMN05421507_117127 | Protein of unknown function. | Trypsin-like peptidase domain-containing protein. | 0.407 |
SDP32250.1 | SDP89734.1 | SAMN05421507_10754 | SAMN05421507_11968 | Protein of unknown function. | Hypothetical protein. | 0.488 |
SDP62803.1 | SDP80681.1 | SAMN05421507_111201 | SAMN05421507_11567 | Ribosomal protein S12 methylthiotransferase accessory factor. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.498 |
SDP62803.1 | SDP89734.1 | SAMN05421507_111201 | SAMN05421507_11968 | Ribosomal protein S12 methylthiotransferase accessory factor. | Hypothetical protein. | 0.558 |
SDP80681.1 | SDO06463.1 | SAMN05421507_11567 | SAMN05421507_1011215 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.493 |
SDP80681.1 | SDP62803.1 | SAMN05421507_11567 | SAMN05421507_111201 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.498 |
SDP80681.1 | SDP89734.1 | SAMN05421507_11567 | SAMN05421507_11968 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.626 |
SDP86592.1 | SDP32250.1 | SAMN05421507_117127 | SAMN05421507_10754 | Trypsin-like peptidase domain-containing protein. | Protein of unknown function. | 0.407 |
SDP86592.1 | SDP89734.1 | SAMN05421507_117127 | SAMN05421507_11968 | Trypsin-like peptidase domain-containing protein. | Hypothetical protein. | 0.555 |
SDP89715.1 | SDP89725.1 | SAMN05421507_11966 | SAMN05421507_11967 | Tetratricopeptide repeat-containing protein. | UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.442 |
SDP89715.1 | SDP89734.1 | SAMN05421507_11966 | SAMN05421507_11968 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.558 |
SDP89725.1 | SDP89715.1 | SAMN05421507_11967 | SAMN05421507_11966 | UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | Tetratricopeptide repeat-containing protein. | 0.442 |
SDP89725.1 | SDP89734.1 | SAMN05421507_11967 | SAMN05421507_11968 | UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | Hypothetical protein. | 0.774 |
SDP89734.1 | SDN81621.1 | SAMN05421507_11968 | SAMN05421507_101365 | Hypothetical protein. | Hypothetical protein. | 0.502 |
SDP89734.1 | SDO06463.1 | SAMN05421507_11968 | SAMN05421507_1011215 | Hypothetical protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.558 |
SDP89734.1 | SDO80734.1 | SAMN05421507_11968 | SAMN05421507_10421 | Hypothetical protein. | Hypothetical protein. | 0.662 |
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