STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP94968.1Signal transduction histidine kinase. (349 aa)    
Predicted Functional Partners:
SDP94963.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.957
SDP94610.1
Signal transduction histidine kinase.
  
 0.859
SDP86465.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.801
SDP13045.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.798
SDP62677.1
Two-component system, NarL family, response regulator DesR.
  
  0.797
SDO57318.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.794
SDN90472.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.792
SDP62390.1
Two-component system, NarL family, response regulator DesR.
  
  0.791
SDP88375.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.790
SDN99400.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.789
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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