STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP94974.1ABC-2 type transport system ATP-binding protein. (286 aa)    
Predicted Functional Partners:
SDP94980.1
ABC-2 family transporter protein.
 
  0.960
SDP14156.1
Macrolide transport system ATP-binding/permease protein.
  
  
  0.704
SDP49216.1
ABC-2 type transport system permease protein.
  
  0.701
SDP05643.1
Putative ABC transport system ATP-binding protein.
  
  
  0.672
SDO13516.1
ABC-2 type transport system permease protein.
  
  0.647
SDN85556.1
Hypothetical protein.
  
  0.647
SDP97519.1
ABC-2 type transport system permease protein.
  
  0.647
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
     
 0.605
SDP96909.1
ABC-2 type transport system permease protein.
  
 
 0.580
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.553
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.