STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP95340.1Cell envelope-related function transcriptional attenuator common domain-containing protein. (324 aa)    
Predicted Functional Partners:
SDP96888.1
Predicted transcriptional regulator, ArsR family.
  
    0.853
SDP73179.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.847
SDP07829.1
LysR family transcriptional regulator, chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
   
    0.835
SDN96604.1
DNA-binding transcriptional regulator, MarR family.
   
    0.832
SDO82963.1
DNA-binding transcriptional regulator, CsgD family.
   
    0.832
SDO47410.1
DNA-binding transcriptional regulator, AcrR family.
   
    0.720
SDO89689.1
NAD-dependent protein deacetylase, SIR2 family.
   
    0.710
cobB-2
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.710
SDP11342.1
NAD-dependent deacetylase.
   
    0.710
SDP11482.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.685
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.