STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP95577.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
SDP95573.1
Integrase core domain-containing protein.
     0.983
SDP95553.1
Hypothetical protein.
 
     0.962
SDP97509.1
Hypothetical protein.
  
     0.582
SDP02686.1
DDE superfamily endonuclease.
  
     0.573
SDP97393.1
DDE superfamily endonuclease.
  
     0.548
SDP97132.1
DDE superfamily endonuclease.
  
     0.505
SDP75773.1
DDE superfamily endonuclease.
  
     0.501
SDP98517.1
DDE superfamily endonuclease.
  
     0.487
SDO29197.1
Glycosyl hydrolases family 8.
  
     0.486
SDP93748.1
Platelet-activating factor acetylhydrolase, isoform II.
  
     0.484
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.