STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP95984.1Cellobiose transport system substrate-binding protein. (421 aa)    
Predicted Functional Partners:
SDP95979.1
Cellobiose transport system permease protein.
 
  0.979
SDP95976.1
Cellobiose transport system permease protein.
 
  0.966
SDO10785.1
Cellobiose transport system permease protein.
 
  0.887
SDO65754.1
Cellobiose transport system permease protein.
 
  0.886
SDO35378.1
Cellobiose transport system permease protein.
 
  0.879
SDP47688.1
Multiple sugar transport system permease protein.
  
 0.865
SDO65782.1
Cellobiose transport system permease protein.
 
  0.843
SDO10810.1
Cellobiose transport system permease protein.
 
  0.837
SDO35358.1
Cellobiose transport system permease protein.
 
  0.828
SDO32955.1
Raffinose/stachyose/melibiose transport system permease protein.
  
 0.818
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.