STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP96218.1ATP-, maltotriose-and DNA-dependent transcriptional regulator MalT. (874 aa)    
Predicted Functional Partners:
SDP94610.1
Signal transduction histidine kinase.
 
 0.970
SDN88588.1
GAF domain-containing protein.
  
 0.947
SDP97595.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
 
 0.916
SDP96215.1
Regulatory protein, luxR family.
 
  
  0.814
SDO30843.1
Hypothetical protein.
  
   0.749
SDO65478.1
PAS domain S-box-containing protein.
  
 0.715
SDO44606.1
Hypothetical protein.
  
 
   0.704
SDO37612.1
Anti-anti-sigma factor.
  
 0.686
SDP97135.1
Regulatory protein, luxR family.
  
     0.684
SDN93313.1
CHAT domain-containing protein.
 
     0.679
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.