Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDP41132.1 | SDP97184.1 | SAMN05421507_10872 | SAMN05421507_13014 | Protoporphyrinogen oxidase. | Chlorite dismutase. | 0.723 |
SDP41132.1 | hemE | SAMN05421507_10872 | SAMN05421507_13016 | Protoporphyrinogen oxidase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.927 |
SDP41132.1 | hemH | SAMN05421507_10872 | SAMN05421507_105307 | Protoporphyrinogen oxidase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.936 |
SDP60619.1 | SDP97184.1 | SAMN05421507_11178 | SAMN05421507_13014 | Hypothetical protein. | Chlorite dismutase. | 0.693 |
SDP60619.1 | hemH | SAMN05421507_11178 | SAMN05421507_105307 | Hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.634 |
SDP81004.1 | SDP97184.1 | SAMN05421507_11589 | SAMN05421507_13014 | Conserved domain-containing protein. | Chlorite dismutase. | 0.622 |
SDP81004.1 | hemH | SAMN05421507_11589 | SAMN05421507_105307 | Conserved domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.615 |
SDP85385.1 | SDP97184.1 | SAMN05421507_11718 | SAMN05421507_13014 | Protein of unknown function. | Chlorite dismutase. | 0.645 |
SDP85385.1 | SDP97200.1 | SAMN05421507_11718 | SAMN05421507_13017 | Protein of unknown function. | Protein of unknown function. | 0.757 |
SDP96914.1 | SDP97184.1 | SAMN05421507_12925 | SAMN05421507_13014 | Cytochrome c oxidase assembly protein subunit 15. | Chlorite dismutase. | 0.707 |
SDP96914.1 | ctaB | SAMN05421507_12925 | SAMN05421507_12945 | Cytochrome c oxidase assembly protein subunit 15. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
SDP96914.1 | hemH | SAMN05421507_12925 | SAMN05421507_105307 | Cytochrome c oxidase assembly protein subunit 15. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.698 |
SDP97184.1 | SDP41132.1 | SAMN05421507_13014 | SAMN05421507_10872 | Chlorite dismutase. | Protoporphyrinogen oxidase. | 0.723 |
SDP97184.1 | SDP60619.1 | SAMN05421507_13014 | SAMN05421507_11178 | Chlorite dismutase. | Hypothetical protein. | 0.693 |
SDP97184.1 | SDP81004.1 | SAMN05421507_13014 | SAMN05421507_11589 | Chlorite dismutase. | Conserved domain-containing protein. | 0.622 |
SDP97184.1 | SDP85385.1 | SAMN05421507_13014 | SAMN05421507_11718 | Chlorite dismutase. | Protein of unknown function. | 0.645 |
SDP97184.1 | SDP96914.1 | SAMN05421507_13014 | SAMN05421507_12925 | Chlorite dismutase. | Cytochrome c oxidase assembly protein subunit 15. | 0.707 |
SDP97184.1 | SDP97188.1 | SAMN05421507_13014 | SAMN05421507_13015 | Chlorite dismutase. | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.966 |
SDP97184.1 | SDP97200.1 | SAMN05421507_13014 | SAMN05421507_13017 | Chlorite dismutase. | Protein of unknown function. | 0.856 |
SDP97184.1 | ctaB | SAMN05421507_13014 | SAMN05421507_12945 | Chlorite dismutase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.761 |
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