STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP98744.1Polyketide cyclase / dehydrase and lipid transport. (146 aa)    
Predicted Functional Partners:
SDP98740.1
Arsenite-transporting ATPase.
 
     0.881
SDP98746.1
Predicted phosphoesterase.
 
     0.844
SDP98733.1
Glucokinase.
       0.816
SDP98736.1
Hypothetical protein.
       0.816
SDP27581.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
  
 
 
 0.814
SDP98750.1
Hypothetical protein.
 
     0.754
SDN71791.1
Helix-turn-helix.
  
     0.746
SDN72850.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.746
SDO93381.1
Anion-transporting ATPase, ArsA/GET3 family.
 
     0.744
SDN72453.1
Putative sensory transduction regulator.
  
     0.737
Your Current Organism:
Lentzea jiangxiensis
NCBI taxonomy Id: 641025
Other names: CGMCC 4.6609, L. jiangxiensis, Lentzea jiangxiensis Li et al. 2012, Lentzea sp. FXJ1.034, NBRC 106680, strain FXJ1.034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.