STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI98645.1KEGG: cpy:Cphy_0466 oxidoreductase domain-containing protein; manually curated; PFAM: Oxidoreductase, N-terminal. (366 aa)    
Predicted Functional Partners:
EHJ01168.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: ssm:Spirs_2575 xylose isomerase domain protein TIM barrel.
 
 
 0.743
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.726
EHI97507.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: cbe:Cbei_0450 xylose isomerase domain-containing protein.
  
 
 0.689
EHJ01501.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; KEGG: mag:amb3807 dehydrogenase and related protein.
  
     0.676
EHJ00001.1
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)); KEGG: cbe:Cbei_2572 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.661
EHJ00586.1
KEGG: cbe:Cbei_4936 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.661
EHJ01342.1
KEGG: cbe:Cbei_4882 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.651
EHJ02315.1
KEGG: cbe:Cbei_4882 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.650
EHJ01499.1
KEGG: sku:Sulku_0158 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.647
EHI98523.1
Glutamine--scyllo-inositol transaminase; KEGG: cbe:Cbei_2597 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.642
Your Current Organism:
Clostridium sp. DLVIII
NCBI taxonomy Id: 641107
Other names: C. sp. DL-VIII, Clostridium sp. DL-VIII
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