STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHJ01204.1PFAM: Cyclic nucleotide-binding; KEGG: cbe:Cbei_1450 CRP/FNR family transcriptional regulator. (176 aa)    
Predicted Functional Partners:
EHJ01412.1
KEGG: cbe:Cbei_4204 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
    
 0.912
EHJ00260.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: cbe:Cbei_1761 TPR repeat-containing protein.
  
 
 
 0.905
EHJ00117.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: cbe:Cbei_1853 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
 
 0.863
EHJ01533.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: cbe:Cbei_4318 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
 
 0.863
EHJ01625.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: cbe:Cbei_1458 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
    
 0.832
EHJ01203.1
Rhodanese-like protein; KEGG: ccb:Clocel_0259 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
  
    0.794
EHJ00675.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: clj:CLJU_c30050 putative sensor histidine kinase/response regulator hybrid; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region.
  
 0.750
EHJ00208.1
HIRAN domain-containing protein; PFAM: HIP116, Rad5p N-terminal; KEGG: cbe:Cbei_1785 HIRAN.
  
  
 0.740
EHI97403.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: cbe:Cbei_0381 ABC-type sugar transport system periplasmic component-like protein.
  
     0.739
EHI98220.1
KEGG: cbe:Cbei_0984 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
 
 
 0.737
Your Current Organism:
Clostridium sp. DLVIII
NCBI taxonomy Id: 641107
Other names: C. sp. DL-VIII, Clostridium sp. DL-VIII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.