STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHJ01522.1PFAM: CheC-like protein; KEGG: cbe:Cbei_4306 CheC, inhibitor of MCP methylation. (200 aa)    
Predicted Functional Partners:
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.999
EHJ01521.1
KEGG: cbe:Cbei_4305 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
 
 
 0.996
EHJ01518.1
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: cbe:Cbei_4302 flagellar motor switch protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); CheC-like protein.
 
 0.995
EHJ01519.1
KEGG: cbe:Cbei_4303 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA).
 
 0.987
EHJ01523.1
KEGG: cbe:Cbei_4307 CheA signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, P2 response regulator-binding; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like.
 
 0.984
EHJ00687.1
KEGG: cbe:Cbei_4020 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
 
 0.972
EHJ01608.1
KEGG: cbe:Cbei_0755 putative CheW protein; PFAM: Signal transduction response regulator, receiver region; CheW-like protein; SMART: Signal transduction response regulator, receiver region; CheW-like protein.
 
 
 0.969
EHJ01483.1
KEGG: cbe:Cbei_4267 flagellar motor switch protein G; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG.
 
 0.966
EHJ01515.1
KEGG: cbt:CLH_0774 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family.
 
 
 0.962
EHJ01520.1
CheW protein; KEGG: cbe:Cbei_4304 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
 
 
 0.957
Your Current Organism:
Clostridium sp. DLVIII
NCBI taxonomy Id: 641107
Other names: C. sp. DL-VIII, Clostridium sp. DL-VIII
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