Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFG30402.1 | guaB | HMPREF9021_01688 | HMPREF9021_01640 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.805 |
EFG30402.1 | purA | HMPREF9021_01688 | HMPREF9021_00300 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.987 |
EFG30402.1 | purH | HMPREF9021_01688 | HMPREF9021_00904 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Bifunctional purine biosynthesis protein purH. | 0.990 |
EFG30402.1 | purL | HMPREF9021_01688 | HMPREF9021_00612 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.999 |
EFG30402.1 | surE | HMPREF9021_01688 | HMPREF9021_01699 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 5'-nucleotidase surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.918 |
EFG30716.2 | EFG31063.2 | HMPREF9021_01322 | HMPREF9021_00891 | Hypothetical protein. | Aspartate aminotransferase. | 0.901 |
EFG30716.2 | argG | HMPREF9021_01322 | HMPREF9021_01006 | Hypothetical protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.906 |
EFG30716.2 | purA | HMPREF9021_01322 | HMPREF9021_00300 | Hypothetical protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
EFG30716.2 | pyrI | HMPREF9021_01322 | HMPREF9021_00808 | Hypothetical protein. | Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase. | 0.912 |
EFG31063.2 | EFG30716.2 | HMPREF9021_00891 | HMPREF9021_01322 | Aspartate aminotransferase. | Hypothetical protein. | 0.901 |
EFG31063.2 | argG | HMPREF9021_00891 | HMPREF9021_01006 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.910 |
EFG31063.2 | purA | HMPREF9021_00891 | HMPREF9021_00300 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.912 |
EFG31063.2 | pyrI | HMPREF9021_00891 | HMPREF9021_00808 | Aspartate aminotransferase. | Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase. | 0.900 |
EFG31449.2 | guaB | HMPREF9021_00719 | HMPREF9021_01640 | Hypoxanthine phosphoribosyltransferase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.944 |
EFG31449.2 | purA | HMPREF9021_00719 | HMPREF9021_00300 | Hypoxanthine phosphoribosyltransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.937 |
EFG31449.2 | purH | HMPREF9021_00719 | HMPREF9021_00904 | Hypoxanthine phosphoribosyltransferase. | Bifunctional purine biosynthesis protein purH. | 0.930 |
EFG31449.2 | purL | HMPREF9021_00719 | HMPREF9021_00612 | Hypoxanthine phosphoribosyltransferase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.465 |
EFG31449.2 | surE | HMPREF9021_00719 | HMPREF9021_01699 | Hypoxanthine phosphoribosyltransferase. | 5'-nucleotidase surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.900 |
argG | EFG30716.2 | HMPREF9021_01006 | HMPREF9021_01322 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Hypothetical protein. | 0.906 |
argG | EFG31063.2 | HMPREF9021_01006 | HMPREF9021_00891 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Aspartate aminotransferase. | 0.910 |
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