Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFG29980.2 | EFG31521.1 | HMPREF9021_02178 | HMPREF9021_00791 | Hypothetical protein. | Hypothetical protein. | 0.546 |
EFG29980.2 | EFG32003.1 | HMPREF9021_02178 | HMPREF9021_00408 | Hypothetical protein. | Hypothetical protein. | 0.767 |
EFG29980.2 | coaX | HMPREF9021_02178 | HMPREF9021_01068 | Hypothetical protein. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.697 |
EFG31065.1 | coaD | HMPREF9021_00893 | HMPREF9021_02669 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.942 |
EFG31065.1 | coaX | HMPREF9021_00893 | HMPREF9021_01068 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.951 |
EFG31065.1 | panC | HMPREF9021_00893 | HMPREF9021_00600 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.886 |
EFG31252.1 | coaX | HMPREF9021_01087 | HMPREF9021_01068 | Hypothetical protein. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.734 |
EFG31521.1 | EFG29980.2 | HMPREF9021_00791 | HMPREF9021_02178 | Hypothetical protein. | Hypothetical protein. | 0.546 |
EFG31521.1 | EFG32003.1 | HMPREF9021_00791 | HMPREF9021_00408 | Hypothetical protein. | Hypothetical protein. | 0.530 |
EFG31521.1 | coaX | HMPREF9021_00791 | HMPREF9021_01068 | Hypothetical protein. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.707 |
EFG31817.1 | coaX | HMPREF9021_00216 | HMPREF9021_01068 | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.810 |
EFG32003.1 | EFG29980.2 | HMPREF9021_00408 | HMPREF9021_02178 | Hypothetical protein. | Hypothetical protein. | 0.767 |
EFG32003.1 | EFG31521.1 | HMPREF9021_00408 | HMPREF9021_00791 | Hypothetical protein. | Hypothetical protein. | 0.530 |
EFG32003.1 | coaX | HMPREF9021_00408 | HMPREF9021_01068 | Hypothetical protein. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.725 |
bioB | coaX | HMPREF9021_02172 | HMPREF9021_01068 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.936 |
coaD | EFG31065.1 | HMPREF9021_02669 | HMPREF9021_00893 | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.942 |
coaD | coaX | HMPREF9021_02669 | HMPREF9021_01068 | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.936 |
coaX | EFG29980.2 | HMPREF9021_01068 | HMPREF9021_02178 | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Hypothetical protein. | 0.697 |
coaX | EFG31065.1 | HMPREF9021_01068 | HMPREF9021_00893 | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.951 |
coaX | EFG31252.1 | HMPREF9021_01068 | HMPREF9021_01087 | biotin-[acetyl-CoA-carboxylase] ligase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Hypothetical protein. | 0.734 |
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