STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ50131.1VirB4 family type IV secretion/conjugal transfer ATPase. (765 aa)    
Predicted Functional Partners:
EJZ50079.1
Hypothetical protein.
 
 
 0.921
EJZ50080.1
Hypothetical protein.
 
  
 0.888
EFG30050.1
P-type conjugative transfer protein VirB9.
 
  
 0.887
EFG30292.2
Hypothetical protein.
 
     0.861
EJZ50130.1
Hypothetical protein.
  
 
 0.831
EFG30046.1
Hypothetical protein.
 
  
 0.791
EJZ50230.1
Hypothetical protein.
 
     0.773
EFG30064.2
Hypothetical protein.
 
     0.772
EFG29762.2
Hypothetical protein.
 
     0.772
EFG30041.1
Hypothetical protein.
 
     0.767
Your Current Organism:
Simonsiella muelleri
NCBI taxonomy Id: 641147
Other names: S. muelleri ATCC 29453, Simonsiella muelleri ATCC 29453, Simonsiella muelleri str. ATCC 29453, Simonsiella muelleri strain ATCC 29453
Server load: low (14%) [HD]