Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI23341.1 | EFI23933.1 | HMPREF9016_01729 | HMPREF9016_00106 | Tat pathway signal sequence domain protein. | SpoVT/AbrB-like protein. | 0.546 |
EFI23341.1 | EFI24517.1 | HMPREF9016_01729 | HMPREF9016_00696 | Tat pathway signal sequence domain protein. | Hypothetical protein. | 0.450 |
EFI23455.1 | EFI23932.1 | HMPREF9016_01844 | HMPREF9016_00105 | Periplasmic binding protein. | Hypothetical protein. | 0.644 |
EFI23455.1 | EFI23933.1 | HMPREF9016_01844 | HMPREF9016_00106 | Periplasmic binding protein. | SpoVT/AbrB-like protein. | 0.432 |
EFI23930.1 | EFI23931.1 | HMPREF9016_00103 | HMPREF9016_00104 | Putative glucose 1-dehydrogenase. | Aromatic ring-opening dioxygenase, catalytic subunit LigB. | 0.648 |
EFI23930.1 | EFI23932.1 | HMPREF9016_00103 | HMPREF9016_00105 | Putative glucose 1-dehydrogenase. | Hypothetical protein. | 0.549 |
EFI23930.1 | EFI23933.1 | HMPREF9016_00103 | HMPREF9016_00106 | Putative glucose 1-dehydrogenase. | SpoVT/AbrB-like protein. | 0.549 |
EFI23931.1 | EFI23930.1 | HMPREF9016_00104 | HMPREF9016_00103 | Aromatic ring-opening dioxygenase, catalytic subunit LigB. | Putative glucose 1-dehydrogenase. | 0.648 |
EFI23931.1 | EFI23932.1 | HMPREF9016_00104 | HMPREF9016_00105 | Aromatic ring-opening dioxygenase, catalytic subunit LigB. | Hypothetical protein. | 0.776 |
EFI23931.1 | EFI23933.1 | HMPREF9016_00104 | HMPREF9016_00106 | Aromatic ring-opening dioxygenase, catalytic subunit LigB. | SpoVT/AbrB-like protein. | 0.773 |
EFI23932.1 | EFI23455.1 | HMPREF9016_00105 | HMPREF9016_01844 | Hypothetical protein. | Periplasmic binding protein. | 0.644 |
EFI23932.1 | EFI23930.1 | HMPREF9016_00105 | HMPREF9016_00103 | Hypothetical protein. | Putative glucose 1-dehydrogenase. | 0.549 |
EFI23932.1 | EFI23931.1 | HMPREF9016_00105 | HMPREF9016_00104 | Hypothetical protein. | Aromatic ring-opening dioxygenase, catalytic subunit LigB. | 0.776 |
EFI23932.1 | EFI23933.1 | HMPREF9016_00105 | HMPREF9016_00106 | Hypothetical protein. | SpoVT/AbrB-like protein. | 0.773 |
EFI23933.1 | EFI23341.1 | HMPREF9016_00106 | HMPREF9016_01729 | SpoVT/AbrB-like protein. | Tat pathway signal sequence domain protein. | 0.546 |
EFI23933.1 | EFI23455.1 | HMPREF9016_00106 | HMPREF9016_01844 | SpoVT/AbrB-like protein. | Periplasmic binding protein. | 0.432 |
EFI23933.1 | EFI23930.1 | HMPREF9016_00106 | HMPREF9016_00103 | SpoVT/AbrB-like protein. | Putative glucose 1-dehydrogenase. | 0.549 |
EFI23933.1 | EFI23931.1 | HMPREF9016_00106 | HMPREF9016_00104 | SpoVT/AbrB-like protein. | Aromatic ring-opening dioxygenase, catalytic subunit LigB. | 0.773 |
EFI23933.1 | EFI23932.1 | HMPREF9016_00106 | HMPREF9016_00105 | SpoVT/AbrB-like protein. | Hypothetical protein. | 0.773 |
EFI23933.1 | EFI24517.1 | HMPREF9016_00106 | HMPREF9016_00696 | SpoVT/AbrB-like protein. | Hypothetical protein. | 0.537 |
page 1 of 2