STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nERDNA-binding protein Ner. (87 aa)    
Predicted Functional Partners:
EFI23974.1
Mu transposase domain protein.
 
     0.889
EFI23989.1
Hypothetical protein.
 
     0.799
EFI23985.1
Hypothetical protein.
 
     0.793
EFI23975.1
Hypothetical protein.
 
     0.770
EFI23990.1
Mor transcription activator family protein.
 
    0.757
EFI24010.1
Phage conserved hypothetical protein.
  
     0.737
EFI24004.1
Hypothetical protein.
  
     0.732
EFI24006.1
Phage virion morphogenesis protein.
  
     0.732
EFI23487.1
Pyridoxamine 5'-phosphate oxidase family protein.
  
     0.718
EFI24018.1
DNA circulation, N-terminal domain protein.
  
     0.716
Your Current Organism:
Neisseria sp. F0314
NCBI taxonomy Id: 641149
Other names: N. sp. oral taxon 014 str. F0314, Neisseria sp. oral taxon 014 str. F0314, Neisseria sp. oral taxon 014 strain F0314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.