Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI23770.1 | EFI24394.1 | HMPREF9016_02166 | HMPREF9016_00571 | Aldose 1-epimerase. | YhcH/YjgK/YiaL family protein. | 0.537 |
EFI23770.1 | EFI24562.1 | HMPREF9016_02166 | HMPREF9016_00741 | Aldose 1-epimerase. | Beta galactosidase small chain; Lactase. | 0.729 |
EFI23883.1 | EFI24394.1 | HMPREF9016_00056 | HMPREF9016_00571 | Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. | YhcH/YjgK/YiaL family protein. | 0.443 |
EFI24393.1 | EFI24394.1 | HMPREF9016_00570 | HMPREF9016_00571 | Hypothetical protein. | YhcH/YjgK/YiaL family protein. | 0.628 |
EFI24393.1 | EFI24395.1 | HMPREF9016_00570 | HMPREF9016_00572 | Hypothetical protein. | Hypothetical protein. | 0.416 |
EFI24394.1 | EFI23770.1 | HMPREF9016_00571 | HMPREF9016_02166 | YhcH/YjgK/YiaL family protein. | Aldose 1-epimerase. | 0.537 |
EFI24394.1 | EFI23883.1 | HMPREF9016_00571 | HMPREF9016_00056 | YhcH/YjgK/YiaL family protein. | Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. | 0.443 |
EFI24394.1 | EFI24393.1 | HMPREF9016_00571 | HMPREF9016_00570 | YhcH/YjgK/YiaL family protein. | Hypothetical protein. | 0.628 |
EFI24394.1 | EFI24395.1 | HMPREF9016_00571 | HMPREF9016_00572 | YhcH/YjgK/YiaL family protein. | Hypothetical protein. | 0.499 |
EFI24394.1 | EFI24562.1 | HMPREF9016_00571 | HMPREF9016_00741 | YhcH/YjgK/YiaL family protein. | Beta galactosidase small chain; Lactase. | 0.814 |
EFI24395.1 | EFI24393.1 | HMPREF9016_00572 | HMPREF9016_00570 | Hypothetical protein. | Hypothetical protein. | 0.416 |
EFI24395.1 | EFI24394.1 | HMPREF9016_00572 | HMPREF9016_00571 | Hypothetical protein. | YhcH/YjgK/YiaL family protein. | 0.499 |
EFI24562.1 | EFI23770.1 | HMPREF9016_00741 | HMPREF9016_02166 | Beta galactosidase small chain; Lactase. | Aldose 1-epimerase. | 0.729 |
EFI24562.1 | EFI24394.1 | HMPREF9016_00741 | HMPREF9016_00571 | Beta galactosidase small chain; Lactase. | YhcH/YjgK/YiaL family protein. | 0.814 |