Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI22977.1 | EFI23425.1 | HMPREF9016_01362 | HMPREF9016_01814 | Isochorismatase family protein. | Isochorismatase family protein. | 0.896 |
EFI22977.1 | EFI24437.1 | HMPREF9016_01362 | HMPREF9016_00615 | Isochorismatase family protein. | Putative cytidine/uridine-specific hydrolase. | 0.866 |
EFI22977.1 | nadE | HMPREF9016_01362 | HMPREF9016_00401 | Isochorismatase family protein. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.408 |
EFI22977.1 | npdA | HMPREF9016_01362 | HMPREF9016_00313 | Isochorismatase family protein. | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | 0.877 |
EFI22977.1 | pncB | HMPREF9016_01362 | HMPREF9016_01019 | Isochorismatase family protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.927 |
EFI23425.1 | EFI22977.1 | HMPREF9016_01814 | HMPREF9016_01362 | Isochorismatase family protein. | Isochorismatase family protein. | 0.896 |
EFI23425.1 | EFI24437.1 | HMPREF9016_01814 | HMPREF9016_00615 | Isochorismatase family protein. | Putative cytidine/uridine-specific hydrolase. | 0.930 |
EFI23425.1 | nadE | HMPREF9016_01814 | HMPREF9016_00401 | Isochorismatase family protein. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.408 |
EFI23425.1 | npdA | HMPREF9016_01814 | HMPREF9016_00313 | Isochorismatase family protein. | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | 0.937 |
EFI23425.1 | pncB | HMPREF9016_01814 | HMPREF9016_01019 | Isochorismatase family protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.988 |
EFI24437.1 | EFI22977.1 | HMPREF9016_00615 | HMPREF9016_01362 | Putative cytidine/uridine-specific hydrolase. | Isochorismatase family protein. | 0.866 |
EFI24437.1 | EFI23425.1 | HMPREF9016_00615 | HMPREF9016_01814 | Putative cytidine/uridine-specific hydrolase. | Isochorismatase family protein. | 0.930 |
EFI24437.1 | npdA | HMPREF9016_00615 | HMPREF9016_00313 | Putative cytidine/uridine-specific hydrolase. | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | 0.930 |
nadE | EFI22977.1 | HMPREF9016_00401 | HMPREF9016_01362 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Isochorismatase family protein. | 0.408 |
nadE | EFI23425.1 | HMPREF9016_00401 | HMPREF9016_01814 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Isochorismatase family protein. | 0.408 |
nadE | npdA | HMPREF9016_00401 | HMPREF9016_00313 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | 0.944 |
nadE | pncB | HMPREF9016_00401 | HMPREF9016_01019 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.638 |
npdA | EFI22977.1 | HMPREF9016_00313 | HMPREF9016_01362 | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | Isochorismatase family protein. | 0.877 |
npdA | EFI23425.1 | HMPREF9016_00313 | HMPREF9016_01814 | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | Isochorismatase family protein. | 0.937 |
npdA | EFI24437.1 | HMPREF9016_00313 | HMPREF9016_00615 | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. | Putative cytidine/uridine-specific hydrolase. | 0.930 |
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