STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI23573.1FCD domain protein. (258 aa)    
Predicted Functional Partners:
EFI24899.1
Transcriptional regulator, GntR family.
  
  
 0.769
EFI24401.1
Hypothetical protein.
 
   
 0.560
EFI23547.1
AMP-binding enzyme.
     
 0.540
EFI24125.1
IclR helix-turn-helix domain protein.
  
  
 0.535
EFI24400.1
Cysteine-rich domain protein.
 
   
 0.513
EFI24402.1
Iron-sulfur cluster-binding protein.
 
   
 0.489
EFI23637.1
Transporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.481
EFI24738.1
FAD binding domain protein.
     
 0.456
rhlE-2
ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family.
       0.429
mtrR
HTH-type transcriptional regulator MtrR.
  
   
 0.414
Your Current Organism:
Neisseria sp. F0314
NCBI taxonomy Id: 641149
Other names: N. sp. oral taxon 014 str. F0314, Neisseria sp. oral taxon 014 str. F0314, Neisseria sp. oral taxon 014 strain F0314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.