Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI22895.1 | EFI22900.1 | HMPREF9016_01280 | HMPREF9016_01285 | Bacterial sugar transferase. | Putative epimerase/dehydratase WbiI. | 0.969 |
EFI22895.1 | EFI22903.1 | HMPREF9016_01280 | HMPREF9016_01288 | Bacterial sugar transferase. | Chain length determinant protein. | 0.999 |
EFI22895.1 | EFI23064.1 | HMPREF9016_01280 | HMPREF9016_01450 | Bacterial sugar transferase. | O-antigen polymerase. | 0.679 |
EFI22895.1 | EFI23118.1 | HMPREF9016_01280 | HMPREF9016_01504 | Bacterial sugar transferase. | Glycosyltransferase, group 2 family protein. | 0.740 |
EFI22895.1 | EFI23121.1 | HMPREF9016_01280 | HMPREF9016_01507 | Bacterial sugar transferase. | ABC-2 type transporter. | 0.451 |
EFI22895.1 | EFI23653.1 | HMPREF9016_01280 | HMPREF9016_02049 | Bacterial sugar transferase. | Hypothetical protein. | 0.774 |
EFI22895.1 | EFI24240.1 | HMPREF9016_01280 | HMPREF9016_00417 | Bacterial sugar transferase. | Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. | 0.990 |
EFI22900.1 | EFI22895.1 | HMPREF9016_01285 | HMPREF9016_01280 | Putative epimerase/dehydratase WbiI. | Bacterial sugar transferase. | 0.969 |
EFI22900.1 | EFI22903.1 | HMPREF9016_01285 | HMPREF9016_01288 | Putative epimerase/dehydratase WbiI. | Chain length determinant protein. | 0.976 |
EFI22900.1 | EFI23064.1 | HMPREF9016_01285 | HMPREF9016_01450 | Putative epimerase/dehydratase WbiI. | O-antigen polymerase. | 0.668 |
EFI22900.1 | EFI23653.1 | HMPREF9016_01285 | HMPREF9016_02049 | Putative epimerase/dehydratase WbiI. | Hypothetical protein. | 0.537 |
EFI22900.1 | EFI24240.1 | HMPREF9016_01285 | HMPREF9016_00417 | Putative epimerase/dehydratase WbiI. | Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. | 0.940 |
EFI22903.1 | EFI22895.1 | HMPREF9016_01288 | HMPREF9016_01280 | Chain length determinant protein. | Bacterial sugar transferase. | 0.999 |
EFI22903.1 | EFI22900.1 | HMPREF9016_01288 | HMPREF9016_01285 | Chain length determinant protein. | Putative epimerase/dehydratase WbiI. | 0.976 |
EFI22903.1 | EFI23064.1 | HMPREF9016_01288 | HMPREF9016_01450 | Chain length determinant protein. | O-antigen polymerase. | 0.549 |
EFI22903.1 | EFI23118.1 | HMPREF9016_01288 | HMPREF9016_01504 | Chain length determinant protein. | Glycosyltransferase, group 2 family protein. | 0.831 |
EFI22903.1 | EFI23653.1 | HMPREF9016_01288 | HMPREF9016_02049 | Chain length determinant protein. | Hypothetical protein. | 0.511 |
EFI22903.1 | EFI24240.1 | HMPREF9016_01288 | HMPREF9016_00417 | Chain length determinant protein. | Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. | 0.999 |
EFI23064.1 | EFI22895.1 | HMPREF9016_01450 | HMPREF9016_01280 | O-antigen polymerase. | Bacterial sugar transferase. | 0.679 |
EFI23064.1 | EFI22900.1 | HMPREF9016_01450 | HMPREF9016_01285 | O-antigen polymerase. | Putative epimerase/dehydratase WbiI. | 0.668 |
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