STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI23659.1Aromatic amino acid transport protein. (413 aa)    
Predicted Functional Partners:
ddc
DABA decarboxylase; DABA-DC.
     
 0.723
hscA
Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
    
  0.708
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
  0.708
EFI23015.1
Histone deacetylase family.
    
  0.706
EFI22780.1
NlpC/P60 family protein.
  
     0.610
EFI23674.1
Nucleotidyl transferase.
    
  0.610
EFI22779.1
Bacteriophage lambda tail assembly protein I.
  
     0.589
EFI24122.1
Transmembrane amino acid transporter protein.
  
     0.577
EFI22781.1
Phage minor tail protein L.
  
     0.568
EFI24260.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Neisseria sp. F0314
NCBI taxonomy Id: 641149
Other names: N. sp. oral taxon 014 str. F0314, Neisseria sp. oral taxon 014 str. F0314, Neisseria sp. oral taxon 014 strain F0314
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