STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1ED19_HELRORRM domain-containing protein. (337 aa)    
Predicted Functional Partners:
T1FJ08_HELRO
SAP domain-containing protein.
   
 0.999
T1FR16_HELRO
Uncharacterized protein.
    
 0.998
T1F6L6_HELRO
Uncharacterized protein.
   
 0.995
T1G0X6_HELRO
Uncharacterized protein.
   
 0.995
T1FYF5_HELRO
Smg4_UPF3 domain-containing protein.
    
 0.994
T1F8K7_HELRO
Uncharacterized protein.
   
 0.992
T1ELX6_HELRO
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.972
T1G9M6_HELRO
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.972
T1EXX7_HELRO
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
  
0.961
T1G0A7_HELRO
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.958
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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