STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1ED88_HELRODynactin domain-containing protein. (587 aa)    
Predicted Functional Partners:
T1F3D7_HELRO
Uncharacterized protein.
   
 0.991
T1F4Z3_HELRO
Uncharacterized protein.
    
 0.988
T1EEE1_HELRO
Uncharacterized protein.
   
 0.987
T1FP91_HELRO
Uncharacterized protein; Belongs to the actin family.
    
 0.986
T1EMC9_HELRO
Uncharacterized protein.
    
 0.984
T1FN22_HELRO
Uncharacterized protein; Belongs to the actin family.
   
 0.984
T1G3H2_HELRO
Uncharacterized protein.
    
 0.984
T1FTP8_HELRO
Uncharacterized protein.
   
 0.979
T1FUU5_HELRO
Uncharacterized protein.
   
 0.979
T1G6D3_HELRO
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.971
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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