STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EG73_HELROE3 ubiquitin-protein ligase. (749 aa)    
Predicted Functional Partners:
T1G279_HELRO
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.948
T1EGM6_HELRO
Receptor protein-tyrosine kinase.
   
 0.943
T1FVQ3_HELRO
Uncharacterized protein.
    
 0.937
T1EFK3_HELRO
HECT domain-containing protein.
  
 
0.927
T1EEB7_HELRO
Uncharacterized protein.
  
 
0.921
T1FF20_HELRO
Cbl-PTB domain-containing protein.
    
 0.920
T1FWY6_HELRO
Uncharacterized protein.
  
 
0.920
T1G932_HELRO
Uncharacterized protein.
  
 
0.920
T1FMJ0_HELRO
RING-type domain-containing protein.
    
 0.913
T1FVF6_HELRO
Uncharacterized protein.
    
 0.859
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.