STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EKJ4_HELROUSP domain-containing protein; Belongs to the peptidase C19 family. (158 aa)    
Predicted Functional Partners:
T1FVF6_HELRO
Uncharacterized protein.
    
 0.624
T1FVQ3_HELRO
Uncharacterized protein.
    
 0.602
T1G9F4_HELRO
Tyrosine--tRNA ligase.
   
  
 0.561
T1FMB5_HELRO
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.548
T1G8C5_HELRO
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.530
T1G0D5_HELRO
RING-type domain-containing protein.
    
 0.520
T1ELD8_HELRO
Uncharacterized protein.
   
 
 0.512
T1G293_HELRO
MATH domain-containing protein.
    
 0.511
T1G4V6_HELRO
AN1-type domain-containing protein.
   
 0.511
T1EGS0_HELRO
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.502
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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