T1EL34_HELRO protein (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1EL34_HELRO

Dimer_Tnp_hAT domain-containing protein. (69 aa)

Predicted Functional Partners:

T1EEZ7_HELRO

0.572

T1EF25_HELRO

0.572

T1EI11_HELRO

0.572

T1EI17_HELRO

0.572

T1EI19_HELRO

0.572

T1FTK8_HELRO

0.572

T1G3X6_HELRO

0.572

T1EJ82_HELRO

0.556

T1EVU3_HELRO

0.556

T1EYQ7_HELRO

0.556

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EEZ7_HELRO	T1EF25_HELRO	T1EEZ7	T1EF25	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.640
T1EEZ7_HELRO	T1EI11_HELRO	T1EEZ7	T1EI11	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.644
T1EEZ7_HELRO	T1EI17_HELRO	T1EEZ7	T1EI17	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.642
T1EEZ7_HELRO	T1EI19_HELRO	T1EEZ7	T1EI19	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.637
T1EEZ7_HELRO	T1EJ82_HELRO	T1EEZ7	T1EJ82	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.757
T1EEZ7_HELRO	T1EL34_HELRO	T1EEZ7	T1EL34	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Dimer_Tnp_hAT domain-containing protein.	0.572
T1EEZ7_HELRO	T1EVU3_HELRO	T1EEZ7	T1EVU3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.757
T1EEZ7_HELRO	T1EYQ7_HELRO	T1EEZ7	T1EYQ7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.757
T1EEZ7_HELRO	T1FTK8_HELRO	T1EEZ7	T1FTK8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.650
T1EEZ7_HELRO	T1G3X6_HELRO	T1EEZ7	T1G3X6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Protein kinase domain-containing protein.	0.650
T1EF25_HELRO	T1EEZ7_HELRO	T1EF25	T1EEZ7	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.640
T1EF25_HELRO	T1EI11_HELRO	T1EF25	T1EI11	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.645
T1EF25_HELRO	T1EI17_HELRO	T1EF25	T1EI17	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.646
T1EF25_HELRO	T1EI19_HELRO	T1EF25	T1EI19	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.638
T1EF25_HELRO	T1EJ82_HELRO	T1EF25	T1EJ82	Protein kinase domain-containing protein.	Uncharacterized protein.	0.757
T1EF25_HELRO	T1EL34_HELRO	T1EF25	T1EL34	Protein kinase domain-containing protein.	Dimer_Tnp_hAT domain-containing protein.	0.572
T1EF25_HELRO	T1EVU3_HELRO	T1EF25	T1EVU3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.757
T1EF25_HELRO	T1EYQ7_HELRO	T1EF25	T1EYQ7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.757
T1EF25_HELRO	T1FTK8_HELRO	T1EF25	T1FTK8	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.650
T1EF25_HELRO	T1G3X6_HELRO	T1EF25	T1G3X6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.647