STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EMC0_HELROWD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (295 aa)    
Predicted Functional Partners:
T1EFI4_HELRO
WD_REPEATS_REGION domain-containing protein.
    
 0.999
T1EG38_HELRO
Zinc_ribbon_16 domain-containing protein.
    
 0.999
T1F165_HELRO
Uncharacterized protein.
    
 0.999
T1FMQ8_HELRO
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.999
T1FNI6_HELRO
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
T1FP98_HELRO
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
0.999
T1FQK9_HELRO
WD_REPEATS_REGION domain-containing protein.
   
 0.999
T1FRH2_HELRO
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
T1FS87_HELRO
Uncharacterized protein.
    
 0.999
T1FSQ4_HELRO
Peptidase S59 domain-containing protein.
    
 0.999
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.