STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EX14_HELROUncharacterized protein. (2000 aa)    
Predicted Functional Partners:
T1FW96_HELRO
Rod_C domain-containing protein.
   
 0.987
T1FR33_HELRO
Uncharacterized protein.
    
 0.985
T1FU97_HELRO
Uncharacterized protein.
    
 0.979
T1EFD4_HELRO
Syntaxin-18_N domain-containing protein.
    
 0.972
T1F8K5_HELRO
Nbas_N domain-containing protein.
    
 0.972
T1FWP7_HELRO
Uncharacterized protein.
   
 0.970
T1FME0_HELRO
Uncharacterized protein.
    
 0.936
T1G7X1_HELRO
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.890
T1FQ69_HELRO
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.865
T1ED49_HELRO
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
    
 0.851
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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