Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T1ED12_HELRO | T1EDS8_HELRO | T1ED12 | T1EDS8 | Uncharacterized protein. | Uncharacterized protein. | 0.843 |
T1ED12_HELRO | T1EE60_HELRO | T1ED12 | T1EE60 | Uncharacterized protein. | Adenylyltransferase and sulfurtransferase MOCS3 homolog; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards U [...] | 0.585 |
T1ED12_HELRO | T1F0X0_HELRO | T1ED12 | T1F0X0 | Uncharacterized protein. | RRM domain-containing protein. | 0.849 |
T1ED12_HELRO | T1FKV4_HELRO | T1ED12 | T1FKV4 | Uncharacterized protein. | Radical_SAM_C domain-containing protein. | 0.831 |
T1ED12_HELRO | T1FQH1_HELRO | T1ED12 | T1FQH1 | Uncharacterized protein. | Uncharacterized protein. | 0.858 |
T1ED12_HELRO | T1G4A2_HELRO | T1ED12 | T1G4A2 | Uncharacterized protein. | N-acetyltransferase domain-containing protein. | 0.831 |
T1ED12_HELRO | T1G7G7_HELRO | T1ED12 | T1G7G7 | Uncharacterized protein. | Uncharacterized protein. | 0.743 |
T1ED12_HELRO | T1G9E5_HELRO | T1ED12 | T1G9E5 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. | 0.635 |
T1EDS8_HELRO | T1ED12_HELRO | T1EDS8 | T1ED12 | Uncharacterized protein. | Uncharacterized protein. | 0.843 |
T1EDS8_HELRO | T1EE60_HELRO | T1EDS8 | T1EE60 | Uncharacterized protein. | Adenylyltransferase and sulfurtransferase MOCS3 homolog; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards U [...] | 0.549 |
T1EDS8_HELRO | T1F0X0_HELRO | T1EDS8 | T1F0X0 | Uncharacterized protein. | RRM domain-containing protein. | 0.987 |
T1EDS8_HELRO | T1FKV4_HELRO | T1EDS8 | T1FKV4 | Uncharacterized protein. | Radical_SAM_C domain-containing protein. | 0.975 |
T1EDS8_HELRO | T1FQH1_HELRO | T1EDS8 | T1FQH1 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
T1EDS8_HELRO | T1FRN5_HELRO | T1EDS8 | T1FRN5 | Uncharacterized protein. | Uncharacterized protein. | 0.782 |
T1EDS8_HELRO | T1G4A2_HELRO | T1EDS8 | T1G4A2 | Uncharacterized protein. | N-acetyltransferase domain-containing protein. | 0.975 |
T1EDS8_HELRO | T1G7G7_HELRO | T1EDS8 | T1G7G7 | Uncharacterized protein. | Uncharacterized protein. | 0.987 |
T1EDS8_HELRO | T1G9E5_HELRO | T1EDS8 | T1G9E5 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. | 0.662 |
T1EE60_HELRO | T1ED12_HELRO | T1EE60 | T1ED12 | Adenylyltransferase and sulfurtransferase MOCS3 homolog; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards U [...] | Uncharacterized protein. | 0.585 |
T1EE60_HELRO | T1EDS8_HELRO | T1EE60 | T1EDS8 | Adenylyltransferase and sulfurtransferase MOCS3 homolog; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards U [...] | Uncharacterized protein. | 0.549 |
T1EE60_HELRO | T1F0X0_HELRO | T1EE60 | T1F0X0 | Adenylyltransferase and sulfurtransferase MOCS3 homolog; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards U [...] | RRM domain-containing protein. | 0.688 |
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