STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1F8X6_HELROUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (307 aa)    
Predicted Functional Partners:
T1EF10_HELRO
Uncharacterized protein.
    
 0.921
T1FV26_HELRO
O-acyltransferase.
     
 0.906
T1G215_HELRO
PNPLA domain-containing protein.
     
 0.906
T1FXQ8_HELRO
WD_REPEATS_REGION domain-containing protein.
    
 0.566
T1G962_HELRO
Uncharacterized protein.
    
 0.563
T1FMJ8_HELRO
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.552
T1FNU5_HELRO
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.521
T1G5K8_HELRO
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.521
T1EG61_HELRO
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
 
    
 0.515
T1FMQ4_HELRO
PKS_AT domain-containing protein.
  
 
 0.501
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.