STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1FMW9_HELROUncharacterized protein. (637 aa)    
Predicted Functional Partners:
T1FXK7_HELRO
Uncharacterized protein.
      
0.602
T1G0Q1_HELRO
Uncharacterized protein.
    
   0.593
T1ECZ4_HELRO
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.587
T1ELL8_HELRO
Uncharacterized protein.
      
 0.575
T1G244_HELRO
Uncharacterized protein.
    
 
0.575
T1EI60_HELRO
Uncharacterized protein.
      
 0.560
T1ELT6_HELRO
Uncharacterized protein.
      
0.553
T1ES66_HELRO
Pepdidase_M14_N domain-containing protein.
      
 0.542
T1EM76_HELRO
Protein-lysine N-methyltransferase HELRODRAFT_157178; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
    
   0.516
T1FZU0_HELRO
Uncharacterized protein.
      
 0.453
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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