STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1FPR0_HELROUncharacterized protein. (1088 aa)    
Predicted Functional Partners:
T1ECY7_HELRO
Brix domain-containing protein.
     
  0.540
T1EED3_HELRO
C2H2-type domain-containing protein.
     
  0.540
T1ENF4_HELRO
Uncharacterized protein.
     
  0.540
T1ENQ2_HELRO
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
     
  0.540
T1ESW2_HELRO
Uncharacterized protein.
     
  0.540
T1F2Q8_HELRO
WD_REPEATS_REGION domain-containing protein.
     
  0.540
T1F4Z2_HELRO
Uncharacterized protein.
     
  0.540
T1FB60_HELRO
Uncharacterized protein.
     
  0.540
T1FH08_HELRO
Uncharacterized protein.
     
  0.540
T1FI82_HELRO
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
     
  0.540
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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