STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1FW14_HELROBTB domain-containing protein. (988 aa)    
Predicted Functional Partners:
T1FT46_HELRO
BBS1 domain-containing protein.
    
 0.672
T1G1W0_HELRO
Uncharacterized protein.
    
 0.666
T1FPQ8_HELRO
TPR_REGION domain-containing protein.
    
 0.655
T1G3W6_HELRO
Uncharacterized protein.
   
 0.631
T1G9V1_HELRO
Bardet-Biedl syndrome 2 protein homolog.
    
 0.629
T1ELR8_HELRO
TPR_REGION domain-containing protein.
    
 0.627
T1F8G5_HELRO
Uncharacterized protein.
    
 0.610
T1G6B6_HELRO
RING-type domain-containing protein.
    
 0.566
T1G8S5_HELRO
MIB/HERC2 domain-containing protein.
    
 0.536
T1ED68_HELRO
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.529
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.