STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syt4Synaptotagmin 4. (335 aa)    
Predicted Functional Partners:
T1FZ89_HELRO
V-SNARE coiled-coil homology domain-containing protein.
   
 0.863
T1G7K7_HELRO
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.798
T1FRD7_HELRO
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.735
Syt1c
Synaptotagmin 1c.
   
0.712
Syt1d
Synaptotagmin 1d.
   
0.712
Syt45
Synaptotagmin 45.
   
0.712
Syt1e
Synaptotagmin 1e.
   
0.712
Syt1a
Synaptotagmin 1a.
   
0.712
Syt1b
Synaptotagmin 1b.
   
0.712
T1ELH9_HELRO
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.684
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.