T1FYP0_HELRO protein (Helobdella robusta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1FYP0_HELRO

eIF2B_5 domain-containing protein. (322 aa)

Predicted Functional Partners:

T1EFQ5_HELRO

0.999

T1EG35_HELRO

0.999

T1EM70_HELRO

0.999

T1FB56_HELRO

0.999

T1FPY8_HELRO

0.999

T1FQB5_HELRO

0.999

T1FVW1_HELRO

0.999

T1FXH0_HELRO

0.999

T1EEV4_HELRO

0.998

T1EMI4_HELRO

0.998

Your Current Organism:

Helobdella robusta

NCBI taxonomy Id: 6412
Other names: H. robusta

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1EEV4_HELRO	T1EFQ5_HELRO	T1EEV4	T1EFQ5	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	W2 domain-containing protein.	0.468
T1EEV4_HELRO	T1EG35_HELRO	T1EEV4	T1EG35	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	S1 motif domain-containing protein.	0.991
T1EEV4_HELRO	T1EM70_HELRO	T1EEV4	T1EM70	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Tr-type G domain-containing protein.	0.999
T1EEV4_HELRO	T1EMI4_HELRO	T1EEV4	T1EMI4	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.999
T1EEV4_HELRO	T1FQB5_HELRO	T1EEV4	T1FQB5	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Uncharacterized protein.	0.995
T1EEV4_HELRO	T1FVW1_HELRO	T1EEV4	T1FVW1	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.472
T1EEV4_HELRO	T1FXH0_HELRO	T1EEV4	T1FXH0	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.999
T1EEV4_HELRO	T1FYP0_HELRO	T1EEV4	T1FYP0	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	eIF2B_5 domain-containing protein.	0.998
T1EFQ5_HELRO	T1EEV4_HELRO	T1EFQ5	T1EEV4	W2 domain-containing protein.	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.468
T1EFQ5_HELRO	T1EG35_HELRO	T1EFQ5	T1EG35	W2 domain-containing protein.	S1 motif domain-containing protein.	0.996
T1EFQ5_HELRO	T1EM70_HELRO	T1EFQ5	T1EM70	W2 domain-containing protein.	Tr-type G domain-containing protein.	0.999
T1EFQ5_HELRO	T1EMI4_HELRO	T1EFQ5	T1EMI4	W2 domain-containing protein.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.504
T1EFQ5_HELRO	T1FB56_HELRO	T1EFQ5	T1FB56	W2 domain-containing protein.	NTP_transferase domain-containing protein.	0.999
T1EFQ5_HELRO	T1FPY8_HELRO	T1EFQ5	T1FPY8	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
T1EFQ5_HELRO	T1FVW1_HELRO	T1EFQ5	T1FVW1	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
T1EFQ5_HELRO	T1FYP0_HELRO	T1EFQ5	T1FYP0	W2 domain-containing protein.	eIF2B_5 domain-containing protein.	0.999
T1EG35_HELRO	T1EEV4_HELRO	T1EG35	T1EEV4	S1 motif domain-containing protein.	Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.991
T1EG35_HELRO	T1EFQ5_HELRO	T1EG35	T1EFQ5	S1 motif domain-containing protein.	W2 domain-containing protein.	0.996
T1EG35_HELRO	T1EM70_HELRO	T1EG35	T1EM70	S1 motif domain-containing protein.	Tr-type G domain-containing protein.	0.998
T1EG35_HELRO	T1EMI4_HELRO	T1EG35	T1EMI4	S1 motif domain-containing protein.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.992