Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T1EEI2_HELRO | T1FQD7_HELRO | T1EEI2 | T1FQD7 | ThiF domain-containing protein. | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.439 |
T1EEI2_HELRO | T1FZQ6_HELRO | T1EEI2 | T1FZQ6 | ThiF domain-containing protein. | Uncharacterized protein. | 0.431 |
T1EF80_HELRO | T1FZQ6_HELRO | T1EF80 | T1FZQ6 | PLD phosphodiesterase domain-containing protein. | Uncharacterized protein. | 0.544 |
T1EPF9_HELRO | T1FZQ6_HELRO | T1EPF9 | T1FZQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
T1EPF9_HELRO | T1G4L7_HELRO | T1EPF9 | T1G4L7 | Uncharacterized protein. | Uncharacterized protein. | 0.441 |
T1FQD7_HELRO | T1EEI2_HELRO | T1FQD7 | T1EEI2 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | ThiF domain-containing protein. | 0.439 |
T1FQD7_HELRO | T1FZQ6_HELRO | T1FQD7 | T1FZQ6 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.422 |
T1FZQ6_HELRO | T1EEI2_HELRO | T1FZQ6 | T1EEI2 | Uncharacterized protein. | ThiF domain-containing protein. | 0.431 |
T1FZQ6_HELRO | T1EF80_HELRO | T1FZQ6 | T1EF80 | Uncharacterized protein. | PLD phosphodiesterase domain-containing protein. | 0.544 |
T1FZQ6_HELRO | T1EPF9_HELRO | T1FZQ6 | T1EPF9 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
T1FZQ6_HELRO | T1FQD7_HELRO | T1FZQ6 | T1FQD7 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.422 |
T1FZQ6_HELRO | T1G4L7_HELRO | T1FZQ6 | T1G4L7 | Uncharacterized protein. | Uncharacterized protein. | 0.441 |
T1G4L7_HELRO | T1EPF9_HELRO | T1G4L7 | T1EPF9 | Uncharacterized protein. | Uncharacterized protein. | 0.441 |
T1G4L7_HELRO | T1FZQ6_HELRO | T1G4L7 | T1FZQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.441 |