STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1G1S8_HELROHist_deacetyl domain-containing protein. (394 aa)    
Predicted Functional Partners:
T1G3I5_HELRO
Uncharacterized protein.
    
 0.956
T1EMC3_HELRO
WD_REPEATS_REGION domain-containing protein.
   
 0.841
T1EGD2_HELRO
HDAC_interact domain-containing protein.
   
 0.760
T1FAU6_HELRO
HDAC_interact domain-containing protein.
   
 0.760
T1FP96_HELRO
Uncharacterized protein.
    
 0.745
T1G0U5_HELRO
Uncharacterized protein.
   
 0.722
T1EFD1_HELRO
SANT domain-containing protein.
    
 0.716
T1FBH3_HELRO
Uncharacterized protein.
    
 0.716
T1FVN0_HELRO
SANT domain-containing protein.
    
 0.716
T1EJB6_HELRO
Uncharacterized protein.
    
 0.714
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.