STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1G6Z3_HELROPept_C1 domain-containing protein; Belongs to the peptidase C1 family. (306 aa)    
Predicted Functional Partners:
T1G969_HELRO
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.772
T1FMN3_HELRO
Uncharacterized protein.
   
 
 0.738
T1EMI1_HELRO
Uncharacterized protein; Belongs to the peptidase C1 family.
   
0.691
T1EGT6_HELRO
L-type lectin-like domain-containing protein.
     
 0.652
T1FRD7_HELRO
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.632
T1EVZ1_HELRO
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 0.630
T1EY29_HELRO
Uncharacterized protein.
   
 
 0.614
T1EFI4_HELRO
WD_REPEATS_REGION domain-containing protein.
     
 0.607
T1FNI6_HELRO
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.602
T1G006_HELRO
GOLD domain-containing protein.
   
 
 0.598
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.