STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1G8C4_HELROUncharacterized protein. (154 aa)    
Predicted Functional Partners:
T1EGJ4_HELRO
Uncharacterized protein.
  
 
 0.919
T1FYH9_HELRO
Semialdhyde_dh domain-containing protein.
   
  
 0.556
T1FMI4_HELRO
PfkB domain-containing protein.
    
  0.457
T1FV76_HELRO
PfkB domain-containing protein.
    
  0.457
T1G815_HELRO
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.457
T1EG79_HELRO
Aldolase_II domain-containing protein.
  
  
 0.433
T1FMD1_HELRO
Aldolase_II domain-containing protein.
  
  
 0.433
T1FYI7_HELRO
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
  
  
 0.433
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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