STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1G8W9_HELROPeptidase_S24 domain-containing protein. (201 aa)    
Predicted Functional Partners:
T1G1I0_HELRO
Uncharacterized protein.
   
 0.877
T1EHJ5_HELRO
Uncharacterized protein.
   
 0.862
T1G2U2_HELRO
Signal peptidase complex subunit 3.
   
 0.856
T1FTD6_HELRO
Uncharacterized protein.
    
 0.808
T1FXL8_HELRO
Uncharacterized protein.
    
 0.758
T1FTZ9_HELRO
WD_REPEATS_REGION domain-containing protein.
    
 0.726
T1FS87_HELRO
Uncharacterized protein.
    
 0.723
T1FAD9_HELRO
Uncharacterized protein.
    
 0.711
T1FU74_HELRO
Uncharacterized protein.
    
 0.711
T1EY67_HELRO
Uncharacterized protein.
   
 0.696
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.