STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER49894.1Phage major capsid protein E. (345 aa)    
Predicted Functional Partners:
SER49924.1
Bacteriophage lambda head decoration protein D.
 
     0.934
SER49978.1
Phage portal protein, lambda family.
 
     0.893
SER50041.1
Phage terminase, large subunit GpA.
 
     0.893
SER49958.1
Signal peptide peptidase SppA.
 
     0.875
SER49802.1
Hypothetical protein.
 
     0.870
SER49773.1
Hypothetical protein.
 
     0.839
SER49835.1
Hypothetical protein.
 
     0.815
SER49747.1
Hypothetical protein.
 
     0.793
SER49717.1
Hypothetical protein.
 
     0.749
SER49654.1
Phage tail tape measure protein, lambda family.
 
     0.572
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.