STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER53175.1Sarcosine oxidase subunit alpha; Belongs to the GcvT family. (1003 aa)    
Predicted Functional Partners:
SER53150.1
Sarcosine oxidase subunit gamma.
 
 0.999
SER53203.1
Sarcosine oxidase subunit delta.
 
 0.999
SER53263.1
Sarcosine oxidase subunit beta.
 
 0.998
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
 0.998
SER81240.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
0.996
SER55589.1
Glycine/D-amino acid oxidase.
 
 0.991
SES08429.1
D-amino-acid dehydrogenase.
  
 0.989
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.988
SES31746.1
Gamma-glutamylputrescine oxidase.
 
 0.985
SER81077.1
Glycine/D-amino acid oxidase.
 
 0.984
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.